STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX55686.1Hypothetical protein. (149 aa)    
Predicted Functional Partners:
SDX55645.1
Hypothetical protein.
       0.714
SDX55661.1
Tape measure domain-containing protein.
       0.714
SDX55598.1
Hypothetical protein.
       0.676
SDX55619.1
Hypothetical protein.
       0.676
SDX55576.1
Transcriptional regulator, Middle operon regulator (Mor) family.
       0.441
SDX55707.1
Hypothetical protein.
       0.426
SDX55723.1
Transcriptional regulator, AlpA family.
       0.426
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.