STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX61987.1Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (812 aa)    
Predicted Functional Partners:
SDX61964.1
Nitrite reductase (NADH) small subunit.
 0.998
SDX61940.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 0.997
SDW24216.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
  
 0.988
SDW60331.1
Rubredoxin.
 
 0.961
SDW32080.1
Rubredoxin; Belongs to the rubredoxin family.
  
 0.959
SDX14982.1
Glutamate synthase (NADH) large subunit.
  
 
 0.959
SDW69414.1
Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.930
SDX09859.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.925
SDX21246.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
 0.925
SDX62005.1
Nitrate/nitrite transport system substrate-binding protein.
 
 
 0.925
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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