STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX63497.1Conjugal transfer ATP-binding protein TraC. (601 aa)    
Predicted Functional Partners:
SDX69439.1
Conjugal transfer ATP-binding protein TraC.
 
     0.962
SDX69629.1
Conjugal transfer ATP-binding protein TraC.
 
     0.962
SDX63358.1
Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
 
     0.859
SDX02375.1
Conjugal transfer pilus assembly protein TraD.
 
  
 0.816
SDX02168.1
Conjugal transfer pilus assembly protein TraB.
 
   
 0.798
SDX02624.1
Conjugative transfer pilus assembly protein TraH.
 
     0.788
SDX02655.1
Conjugal transfer mating pair stabilization protein TraG.
 
   
 0.787
SDX69364.1
Conjugal transfer pilus assembly protein TraU.
 
   
 0.785
SDX69565.1
Conjugal transfer pilus assembly protein TraU.
 
   
 0.785
SDX69388.1
glycyl-tRNA synthetase beta chain.
 
     0.784
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.