STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHS24_008854Protein kinase domain-containing protein. (909 aa)    
Predicted Functional Partners:
EHS24_008681
Uncharacterized protein.
   
 0.949
CDC5
Serine/threonine-protein kinase.
  
0.909
CDC28
Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily.
  
 0.881
ATP2
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.869
EHS24_002555
Uncharacterized protein.
   
 0.828
EHS24_007062
Uncharacterized protein.
   
 0.828
CDH1
Substrate-specific activator of APC-dependent proteolysis.
   
 0.822
CDC20
Ubiquitin-protein transferase activating protein.
   
 0.822
PHO85
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
  
0.820
EHS24_007217
HORMA domain-containing protein.
   
 0.811
Your Current Organism:
Apiotrichum porosum
NCBI taxonomy Id: 105984
Other names: A. porosum, CBS 2040, NRRL Y-17198, Trichosporon porosum, Trichosporon sp. ICMP 16990, Trichosporon sp. ICMP 16991, Trichosporon sp. SJ13S15, Trichosporon sp. SJ15S11, VKM Y-3
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