STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHS24_007572CCHC-type domain-containing protein. (647 aa)    
Predicted Functional Partners:
EHS24_009674
VASt domain-containing protein.
    
 0.961
EHS24_006197
Uncharacterized protein.
   
 0.932
EHS24_005480
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.856
EHS24_000282
Uncharacterized protein.
    
 0.856
EHS24_000816
Uncharacterized protein.
    
 0.856
CNB1
Calcineurin subunit B.
    
 0.789
CNA1
Serine/threonine-protein phosphatase.
    
 0.766
EHS24_001838
Uncharacterized protein.
    
  0.748
IPI3
Pre-rRNA-processing protein ipi3.
    
  0.748
EHS24_001422
Uncharacterized protein.
    
  0.748
Your Current Organism:
Apiotrichum porosum
NCBI taxonomy Id: 105984
Other names: A. porosum, CBS 2040, NRRL Y-17198, Trichosporon porosum, Trichosporon sp. ICMP 16990, Trichosporon sp. ICMP 16991, Trichosporon sp. SJ13S15, Trichosporon sp. SJ15S11, VKM Y-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.