STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHS24_0045392-Hacid_dh_C domain-containing protein. (396 aa)    
Predicted Functional Partners:
SER1
Phosphoserine transaminase.
  
 0.939
TRP5
Tryptophan synthase.
  
 0.922
SHM2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.811
CYB2_1
Cytochrome b2, mitochondrial.
    
 0.805
CYB2_2
Cytochrome b2, mitochondrial.
    
 0.805
DFR1
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
  
 0.803
EHS24_002806
Uncharacterized protein.
    
 0.788
EHS24_002957
Uncharacterized protein.
    
 0.788
EHS24_007242
Uncharacterized protein.
    
 0.788
EHS24_007086
Aminotran_5 domain-containing protein.
  
 
 0.782
Your Current Organism:
Apiotrichum porosum
NCBI taxonomy Id: 105984
Other names: A. porosum, CBS 2040, NRRL Y-17198, Trichosporon porosum, Trichosporon sp. ICMP 16990, Trichosporon sp. ICMP 16991, Trichosporon sp. SJ13S15, Trichosporon sp. SJ15S11, VKM Y-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.