STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHS24_000256Uncharacterized protein. (811 aa)    
Predicted Functional Partners:
EHS24_008919
NFACT-R_1 domain-containing protein.
    
 0.792
EHS24_002043
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.585
RCY1
F-box protein: endocytic membrane traffic, recycling ReCYcling 1.
     
 0.571
SEC10
Exocyst complex component 5.
     
 0.571
SEC6
SNARE-binding exocyst subunit S6.
    
 0.564
EHS24_000232
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 
  0.467
ARF3
Arf GTPase arf3; Belongs to the small GTPase superfamily. Arf family.
   
 
  0.467
EHS24_001080
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 
  0.467
SEC4
GTP-binding protein.
     
 0.420
NCA2
Nuclear control of ATPase protein 2.
     
 0.420
Your Current Organism:
Apiotrichum porosum
NCBI taxonomy Id: 105984
Other names: A. porosum, CBS 2040, NRRL Y-17198, Trichosporon porosum, Trichosporon sp. ICMP 16990, Trichosporon sp. ICMP 16991, Trichosporon sp. SJ13S15, Trichosporon sp. SJ15S11, VKM Y-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.