STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BPD5Signal recognition particle, SRP54 subunit, M-domain-containing protein. (182 aa)    
Predicted Functional Partners:
A0A1Y2EGT7
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
    
 0.999
A0A1Y2FRT3
Signal recognition particle, SRP9/SRP14 subunit.
   
 0.999
A0A1Y2FTX3
Signal recognition particle, SRP19 subunit.
   
 0.999
A0A1Y2ESR7
Signal recognition particle 14kD protein-domain-containing protein.
    
 0.998
A0A1Y2FVP6
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.998
A0A1Y2G2X6
SRP72 domain-containing protein.
   
 0.998
A0A1Y2FZ62
Ribosomal L29 protein-domain-containing protein.
   
 
 0.985
A0A1Y2DZ75
Putative ribosomal protein L26.
  
 0.984
A0A1Y2G1U7
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 
 0.970
A0A1Y2FZY8
SecY subunit domain-containing protein; Belongs to the SecY/SEC61-alpha family.
   
 0.960
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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