STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CB61Uncharacterized protein. (239 aa)    
Predicted Functional Partners:
A0A1Y2CBQ1
Uncharacterized protein.
 
      0.873
A0A1Y2G3E9
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.568
A0A1Y2G188
Sec63 Brl domain-domain-containing protein.
    
 
 0.556
A0A1Y2EUT5
Uncharacterized protein.
   
 
 0.539
A0A1Y2EVP7
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.539
A0A1Y2EQK5
40S ribosomal protein S10.
    
 
 0.523
A0A1Y2F8X7
RING-type domain-containing protein.
    
 
 0.507
A0A1Y2F073
WD40-repeat-containing domain protein.
    
 
 0.496
A0A1Y2ETA1
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.473
A0A1Y2CYT4
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
    0.459
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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