STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CCJ040S ribosomal protein S13, variant; Belongs to the universal ribosomal protein uS15 family. (151 aa)    
Predicted Functional Partners:
A0A1Y2C3Y4
Ribosomal protein L23/L15e core domain-containing protein.
  
 0.995
A0A1Y2CC86
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.995
A0A1Y2G1U7
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.995
A0A1Y2CP72
Ribosomal protein S14.
   
 0.994
A0A1Y2CPB4
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.994
A0A1Y2D6Z4
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.994
A0A1Y2DB04
40S ribosomal protein S27.
   
 0.994
A0A1Y2EQK5
40S ribosomal protein S10.
   
 0.994
A0A1Y2ETY8
Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
   
 0.994
A0A1Y2EYH4
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.994
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.