STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DB12Uncharacterized protein. (731 aa)    
Predicted Functional Partners:
A0A1Y2FG02
WD40-repeat-containing domain protein.
    
 
 0.936
A0A1Y2ET67
PAPA-1 domain-containing protein.
    
 
 0.925
A0A1Y2EU10
MRG-domain-containing protein.
    
 
 0.925
A0A1Y2DHG3
JmjC domain, hydroxylase-domain-containing protein.
    
 
 0.800
A0A1Y2ELF3
Uncharacterized protein.
   
 
 0.786
A0A1Y2ENX8
HDAC_interact domain-containing protein.
   
 
 0.786
A0A1Y2FEM8
HDAC_interact domain-containing protein.
   
 
 0.786
A0A1Y2G357
Thioredoxin-like_fold domain-containing protein.
   
 
 0.766
A0A1Y2E8Z4
Hist_deacetyl domain-containing protein.
   
 
 0.751
A0A1Y2FA22
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 
 0.751
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
Server load: low (22%) [HD]