STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DBB2Surfeit locus protein 6-domain-containing protein. (494 aa)    
Predicted Functional Partners:
A0A1Y2E626
Brix domain-domain-containing protein.
   
   0.989
A0A1Y2FFE1
RRM domain-containing protein.
   
 
 0.979
A0A1Y2FCU9
Eukaryotic rRNA processing protein EBP2-domain-containing protein.
   
 
 0.978
A0A1Y2G4F6
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.971
A0A1Y2G376
Protein MAK16; Belongs to the MAK16 family.
   
   0.969
A0A1Y2ELI3
Nucleolar protein,Nop52-domain-containing protein.
   
 
 0.968
A0A1Y2FBN6
Rrp15p-domain-containing protein.
   
 
 0.954
A0A1Y2FTQ0
Putative ribosomal large subunit assembly and maintenance-related protein.
   
 
 0.947
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.925
A0A1Y2FWY0
Ribosomal protein L24e-domain-containing protein.
   
 
 0.924
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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