STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DCE8P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. (616 aa)    
Predicted Functional Partners:
A0A1Y2EQX9
Sas10 domain-containing protein.
   
 0.998
A0A1Y2FXY4
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.996
A0A1Y2G1W1
Nucleolar protein 14.
   
 
 0.992
A0A1Y2D796
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
  
0.987
A0A1Y2DBG2
WD40-repeat-containing domain protein.
   
 0.986
A0A1Y2F2H4
WD40-repeat-containing domain protein.
   
 
 0.986
A0A1Y2G8A4
U3 small nucleolar RNA-associated protein 22.
   
 0.985
A0A1Y2G206
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
  
0.981
A0A1Y2G5S7
CBF/Mak21 family-domain-containing protein.
   
  0.977
A0A1Y2EDH4
DRIM domain-containing protein.
   
 
 0.976
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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