STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DCU6Uncharacterized protein. (455 aa)    
Predicted Functional Partners:
A0A1Y2FU05
Pre-mRNA splicing factor component-domain-containing protein.
   
  0.977
A0A1Y2FBP3
Pre-mRNA-splicing factor Cwf15/Cwc15.
   
  0.974
A0A1Y2FCT8
Catenin-beta-like protein.
    
  0.961
A0A1Y2FMP4
WD40 repeat-like protein.
    
  0.956
A0A1Y2G2U9
Matrin-type domain-containing protein.
   
   0.875
A0A1Y2ETZ4
Ubiquitin-like protein.
    
  0.868
A0A1Y2G4B8
PWI domain-containing protein.
   
 0.867
A0A1Y2ES27
PRP38 family-domain-containing protein.
   
 0.834
A0A1Y2CP60
Splicing factor, Prp19-binding domain-domain-containing protein.
   
  0.833
A0A1Y2FZZ3
C2H2-type domain-containing protein.
   
  0.833
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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