STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DEL3Uncharacterized protein. (485 aa)    
Predicted Functional Partners:
A0A1Y2FEM0
Pyridoxamine 5'-phosphate oxidase-domain-containing protein.
 
      0.849
A0A1Y2FR25
tRNA synthetases class I, catalytic domain-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.775
A0A1Y2G5V4
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.775
A0A1Y2FTQ0
Putative ribosomal large subunit assembly and maintenance-related protein.
   
    0.654
A0A1Y2ES28
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.643
A0A1Y2ESJ0
Pseudouridine synthase.
  
 
 0.626
A0A1Y2FN39
Uncharacterized protein.
   
 
 0.589
A0A1Y2ENV8
Uncharacterized protein.
  
  
0.580
A0A1Y2D796
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
  
 
 0.566
A0A1Y2E658
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
    0.539
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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