STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DHD5Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (138 aa)    
Predicted Functional Partners:
A0A1Y2FU15
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
A0A1Y2FY06
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
   
 0.999
A0A1Y2FYB1
NO signaling/Golgi transport ligand-binding domain-containing protein.
   
 0.999
A0A1Y2G3S3
Trafficking protein particle complex subunit BET3.
   
 0.999
A0A1Y2DBA2
Sedlin.
    
 0.998
A0A1Y2FZA8
Sedlin, N-terminal conserved region-domain-containing protein.
   
 0.998
A0A1Y2EZA2
Trafficking protein particle complex subunit 10.
    
 0.997
A0A1Y2F8M5
ER-golgi trafficking TRAPP I complex 85 kDa subunit-domain-containing protein.
    
 0.997
A0A1Y2DX50
Transport protein particle complex subunit.
   
 0.996
A0A1Y2FN09
Gryzun, putative trafficking through golgi-domain-containing protein.
    
 0.995
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.