STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DJQ9Smg-4/UPF3 family-domain-containing protein. (417 aa)    
Predicted Functional Partners:
A0A1Y2DKR8
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.997
A0A1Y2FL58
Armadillo-type protein.
   
 0.997
A0A1Y2G4B8
PWI domain-containing protein.
    
 0.995
A0A1Y2G4I2
RRM domain-containing protein.
    
 0.995
A0A1Y2FXN4
PINc domain-containing protein.
   
 0.984
A0A1Y2DHG1
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 0.983
A0A1Y2E279
RRM domain-containing protein.
    
 0.980
A0A1Y2EM05
MI domain-containing protein.
     
 0.956
A0A1Y2EPI0
Uncharacterized protein.
    
 0.950
A0A1Y2EM00
Cwf18 pre-mRNA splicing factor-domain-containing protein.
     
 0.942
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.