STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DPG6RRM domain-containing protein. (232 aa)    
Predicted Functional Partners:
A0A1Y2EWN9
Kinase-like domain-containing protein.
    
 0.967
A0A1Y2FXG9
RRM domain-containing protein.
   
 0.910
A0A1Y2FXS8
Uncharacterized protein.
   
 
 0.901
A0A1Y2FU05
Pre-mRNA splicing factor component-domain-containing protein.
    
 
 0.889
A0A1Y2DML5
Nuclear cap-binding protein subunit 2.
    
 0.886
A0A1Y2EPI0
Uncharacterized protein.
   
 0.868
A0A1Y2D437
Suf domain-containing protein.
   
 0.854
A0A1Y2G2Z9
MIF4G like-domain-containing protein.
    
 0.847
A0A1Y2CYT4
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.846
A0A1Y2FWD6
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.841
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.