STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DTY4DUF262 domain-containing protein. (490 aa)    
Predicted Functional Partners:
A0A1Y2EM05
MI domain-containing protein.
    
 0.907
A0A1Y2EGA8
WD40-repeat-containing domain protein.
    
 0.899
A0A1Y2CB56
Helicase ATP-binding domain-containing protein.
    
 0.894
A0A1Y2F7M4
Pre-mRNA splicing factor-domain-containing protein.
   
 0.885
A0A1Y2FYV4
Small nuclear ribonucleo protein SmF.
    
 0.882
A0A1Y2G2B6
CWC16 protein.
   
 0.879
A0A1Y2G1Z5
Pre-mRNA splicing Prp18-interacting factor-domain-containing protein.
    
 0.875
A0A1Y2EY04
Small nuclear ribonucleoprotein G.
    
 0.870
A0A1Y2FWD6
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.868
A0A1Y2G2H0
Small nuclear ribonucleoprotein Sm D2.
    
 0.868
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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