STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DZB8Uncharacterized protein. (582 aa)    
Predicted Functional Partners:
A0A1Y2EWK0
HAD-like domain-containing protein.
    
  0.743
A0A1Y2G365
WD40-repeat-containing domain protein.
    
 0.680
A0A1Y2FL57
B30.2/SPRY domain-containing protein.
    
 0.677
A0A1Y2DWK5
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.657
A0A1Y2FD50
TPR_REGION domain-containing protein.
    
 0.657
A0A1Y2EM46
Methyltransferase type 11.
    
 0.651
A0A1Y2ECW0
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.642
A0A1Y2EVV4
Vesicle budding-like protein; Belongs to the WD repeat SEC13 family.
    
 0.642
A0A1Y2G013
Protein kinase domain-containing protein.
    
 0.640
A0A1Y2FQ08
Nucleoporin Nup120/160-domain-containing protein.
    
  0.627
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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