STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DZS6Sec23-binding domain of Sec16-domain-containing protein. (175 aa)    
Predicted Functional Partners:
A0A1Y2EVV4
Vesicle budding-like protein; Belongs to the WD repeat SEC13 family.
    
 0.994
A0A1Y2G3A4
Uncharacterized protein.
   
 0.982
A0A1Y2G8F0
Sec23/Sec24 trunk domain-domain-containing protein.
   
 0.982
A0A1Y2G868
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.966
A0A1Y2G883
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.966
A0A1Y2G0V9
WD_REPEATS_REGION domain-containing protein.
   
 0.927
A0A1Y2DBB0
ADP-ribosylation factor family-domain-containing protein; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.907
A0A1Y2D5E3
VWFA domain-containing protein.
   
 0.906
A0A1Y2G770
Heterokaryon incompatibility Het-C.
   
 0.906
A0A1Y2DZF1
Uncharacterized protein.
 
      0.884
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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