STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2EMG7Nucleoporin Nup186/Nup192/Nup205. (2092 aa)    
Predicted Functional Partners:
A0A1Y2FYQ8
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
   
 0.999
A0A1Y2G0D9
Nuclear pore protein.
   
 0.999
A0A1Y2G1B0
Nsp1-like C-terminal region-domain-containing protein.
   
 0.997
A0A1Y2ECW0
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.996
A0A1Y2ET83
Nucleoporin complex subunit 54-domain-containing protein.
   
 0.996
A0A1Y2FQ08
Nucleoporin Nup120/160-domain-containing protein.
  
 0.995
A0A1Y2DWK5
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.992
A0A1Y2G1P2
Nucleoporin subcomplex protein binding to Pom34-domain-containing protein.
   
 0.991
A0A1Y2EM46
Methyltransferase type 11.
   
 0.990
A0A1Y2G478
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
   
 0.988
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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