STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2EXT1P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. (407 aa)    
Predicted Functional Partners:
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.904
A0A1Y2G470
Uncharacterized protein.
   
 0.884
A0A1Y2FA01
CP-type G domain-containing protein.
   
 0.873
A0A1Y2FCU9
Eukaryotic rRNA processing protein EBP2-domain-containing protein.
   
 0.862
A0A1Y2CJH8
rRNA-processing arch domain-domain-containing protein.
   
 0.844
A0A1Y2EU30
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
  
0.835
A0A1Y2EXB3
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.819
A0A1Y2G2C7
Small nuclear ribonucleo protein.
   
 0.812
A0A1Y2DHG1
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
  
0.809
A0A1Y2G1W1
Nucleolar protein 14.
   
 0.802
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.