STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F2D2Uncharacterized protein. (1019 aa)    
Predicted Functional Partners:
A0A1Y2G4V3
Histone-fold-containing protein.
    
 
 0.949
A0A1Y2CN80
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.909
A0A1Y2FYL9
Putative chromatin remodelling complex ATPase chain.
    
 0.909
A0A1Y2G0H6
SLIDE domain-containing protein.
    
 0.909
A0A1Y2FVK2
SNF2 family N-terminal domain-domain-containing protein.
    
 0.877
A0A1Y2FWV7
SNF2 family N-terminal domain-domain-containing protein.
    
 0.877
A0A1Y2G2C7
Small nuclear ribonucleo protein.
   
 0.805
A0A1Y2D8Z1
Uncharacterized protein.
   
 0.793
A0A1Y2DIM2
DNA polymerase phi-domain-containing protein.
    
 0.789
A0A1Y2CY08
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.774
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.