STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F5Y0Sec63 Brl domain-domain-containing protein. (2173 aa)    
Predicted Functional Partners:
A0A1Y2EHE8
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.999
A0A1Y2F3I2
NUC071 domain-domain-containing protein.
   
 0.999
A0A1Y2FI28
PRP1_N domain-containing protein.
   
 0.998
A0A1Y2G2P6
Putative subunit of the heterotrimeric G protein.
   
 0.998
A0A1Y2FXN2
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.996
A0A1Y2EKX1
Splicing factor 3b, subunit 3, 130kDa, isoform CRA_b.
   
 
 0.995
A0A1Y2FWD6
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.994
A0A1Y2FYV4
Small nuclear ribonucleo protein SmF.
   
 0.994
A0A1Y2ENE1
Sm domain-containing protein.
   
 0.993
A0A1Y2FFZ6
Nop domain-containing protein.
    
 0.993
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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