STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F5Z4Uncharacterized protein. (905 aa)    
Predicted Functional Partners:
A0A1Y2F439
Spindle pole body component.
    
 0.793
A0A1Y2ELH7
Carboxyl transferase.
   
 0.747
A0A1Y2FYW4
S4 RNA-binding domain-containing protein.
   
 
 0.743
A0A1Y2FQC6
Ribosomal protein S8.
   
   0.738
A0A1Y2G0R6
Mitochondrial ribosomal protein S25-domain-containing protein.
    
   0.737
A0A1Y2D7A0
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.716
A0A1Y2EU01
Ribosomal protein S2, flavodoxin-like domain-containing protein.
   
 
 0.700
A0A1Y2FY64
Spindle pole body component.
    
 0.690
A0A1Y2EXG7
Spindle pole body component.
    
 0.684
A0A1Y2F720
Uncharacterized protein.
    
 0.684
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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