STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F9J0RING-CH-type domain-containing protein. (462 aa)    
Predicted Functional Partners:
A0A1Y2CFL7
UBX domain-containing protein.
    
 
 0.763
A0A1Y2FTR4
FK506-binding protein.
    
 
 0.727
A0A1Y2D4X7
UBC-like protein.
    
 
 0.648
A0A1Y2EZQ1
NOT2_3_5 domain-containing protein.
    
 
 0.640
A0A1Y2FEB4
CUE domain-containing protein.
    
 
 0.640
A0A1Y2ESC9
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.602
A0A1Y2G0S7
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.579
A0A1Y2ER00
ATPase family protein.
    
 
 0.559
A0A1Y2EVT0
Valosin-containing protein; Belongs to the AAA ATPase family.
    
 
 0.559
A0A1Y2FKY8
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
    
 
 0.559
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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