STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FEG9RBR-type E3 ubiquitin transferase. (213 aa)    
Predicted Functional Partners:
A0A1Y2EPI4
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.739
A0A1Y2ER33
Uncharacterized protein.
    
 0.683
A0A1Y2FVM7
RBR-type E3 ubiquitin transferase.
    
 0.683
A0A1Y2C1X8
Ubiquitin.
    
  0.605
A0A1Y2CXL4
Ubiquitin-related domain-containing protein.
    
  0.605
A0A1Y2F0H9
Uncharacterized protein.
    
  0.605
A0A1Y2E7V7
Ubiquitin-related domain-containing protein.
   
  0.548
A0A1Y2ETT5
Ubiquitin family-domain-containing protein.
   
  0.548
A0A1Y2FX25
Uncharacterized protein.
   
  0.548
A0A1Y2FX63
Uncharacterized protein.
   
  0.548
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.