STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FEL4Uncharacterized protein. (620 aa)    
Predicted Functional Partners:
A0A1Y2G2U9
Matrin-type domain-containing protein.
   
 0.978
A0A1Y2DE68
PSP domain-containing protein.
   
 0.972
A0A1Y2EKX1
Splicing factor 3b, subunit 3, 130kDa, isoform CRA_b.
   
 0.971
A0A1Y2F7J6
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.971
A0A1Y2EGB5
PHF5-like protein.
    
 0.970
A0A1Y2G2C7
Small nuclear ribonucleo protein.
    
 0.970
A0A1Y2C2B9
Pre-mRNA splicing factor PRP21 like protein-domain-containing protein.
   
 0.968
A0A1Y2DHT9
Matrin-type domain-containing protein.
    
 0.966
A0A1Y2G3A2
U2 small nuclear ribonucleo protein A.
    
 0.963
A0A1Y2FVP5
Uncharacterized protein.
    
 0.951
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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