STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FFG426S proteasome subunit RPN7-domain-containing protein. (497 aa)    
Predicted Functional Partners:
A0A1Y2C474
COP9 signalosome complex subunit 5.
   
 0.999
A0A1Y2ENH5
PCI domain-containing protein.
   
 0.999
A0A1Y2EZ20
PCI domain-containing protein.
   
 0.999
A0A1Y2G1A0
Mov34-domain-containing protein.
  
 0.999
A0A1Y2G4F5
PCI domain-domain-containing protein.
   
 0.999
A0A1Y2FYB7
PCI domain-containing protein.
   
 0.997
A0A1Y2FGE4
Ubiquitin.
    
 0.978
A0A1Y2FBF1
CPSF A subunit region-domain-containing protein.
    
 0.967
A0A1Y2ECL6
RING-type domain-containing protein.
   
 0.962
A0A1Y2EHG7
Cullin family-domain-containing protein; Belongs to the cullin family.
    
 0.924
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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