STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FKL2D123-domain-containing protein. (426 aa)    
Predicted Functional Partners:
A0A1Y2F054
Elongation factor Tu GTP binding domain-domain-containing protein.
    
 
 0.939
A0A1Y2FZG8
Domain found in IF2B/IF5-domain-containing protein.
    
 
 0.851
A0A1Y2C474
COP9 signalosome complex subunit 5.
   
    0.567
A0A1Y2EV41
NUDIX hydrolase domain-like protein.
   
  
 0.561
A0A1Y2G2E8
Short-chain dehydrogenase.
 
 
   0.525
BCR35DRAFT_5
RING-type domain-containing protein.
   
 
 0.509
A0A1Y2FYU8
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
 
      0.483
A0A1Y2G1A1
Eukaryotic translation initiation factor 2 alpha subunit-domain-containing protein.
   
 
 0.452
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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