STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FPW7Chitinase; Belongs to the glycosyl hydrolase 18 family. (403 aa)    
Predicted Functional Partners:
A0A1Y2CC78
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.775
A0A1Y2ECL3
Beta-hexosaminidase.
    
 0.775
A0A1Y2E262
Cytochrome c oxidase subunit VB-domain-containing protein.
   
 0.747
A0A1Y2FTR2
Uncharacterized protein.
   
 0.741
A0A1Y2D0I9
Cytochrome-c oxidase chain VI.
   
 0.712
A0A1Y2CBK5
Cytochrome c oxidase subunit IV-domain-containing protein.
   
 0.683
A0A1Y2FEP8
BZIP domain-containing protein.
   
 0.662
A0A1Y2CQJ6
Cytochrome oxidase c subunit VIb-domain-containing protein.
   
  0.650
A0A1Y2CJR8
Ubiquinol-cytochrome-c reductase complex subunit-domain-containing protein.
   
  0.604
A0A1Y2G319
Glycoside hydrolase superfamily; Belongs to the glycosyl hydrolase 18 family.
  
  
 
0.603
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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