STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FRY1Autophagy-related protein 3. (393 aa)    
Predicted Functional Partners:
A0A1Y2ESJ4
E1-like protein-activating.
  
 
 0.999
A0A1Y2F4N1
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
    
 0.998
A0A1Y2FX35
Autophagy-related protein.
  
 0.998
A0A1Y2FYP3
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
   
 0.995
A0A1Y2D5N2
Autophagy-related protein 16.
   
 0.986
A0A1Y2G013
Protein kinase domain-containing protein.
   
 
 0.966
A0A1Y2FXB6
Alpha/Beta hydrolase protein.
   
 
 0.956
A0A1Y2G167
Autophagy protein Apg6-domain-containing protein.
   
 0.916
A0A1Y2D0N1
WD40 repeat-like protein.
    
 0.907
A0A1Y2C2E9
Phosphatidylinositol 3-kinase VPS34.
    
 0.885
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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