STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FTV7Rab-GTPase-TBC domain-domain-containing protein. (700 aa)    
Predicted Functional Partners:
A0A1Y2DEL8
GTP-binding protein ypt1.
    
 0.702
A0A1Y2CDZ6
Ras family-domain-containing protein.
    
 0.683
A0A1Y2DA85
Uncharacterized protein.
    
 0.649
A0A1Y2DA90
Ras family-domain-containing protein.
    
 0.649
A0A1Y2FLM0
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.649
A0A1Y2FQ00
Ras family-domain-containing protein.
    
 0.649
A0A1Y2E430
VPS9 domain-containing protein.
   
  0.625
A0A1Y2G407
Uncharacterized protein.
   
  0.625
A0A1Y2FW38
VHS domain-domain-containing protein.
    
  0.620
A0A1Y2D5N3
Uncharacterized protein.
    
 0.588
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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