STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FZI6Uncharacterized protein. (307 aa)    
Predicted Functional Partners:
A0A1Y2EN00
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 
 0.848
A0A1Y2G169
Ribosome biogenesis protein Nop16.
   
  
 0.777
A0A1Y2CK02
Ribosome 60S biogenesis N-terminal-domain-containing protein.
    
 
 0.735
A0A1Y2E088
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.695
A0A1Y2G3L0
RRM domain-containing protein.
   
 
 0.672
A0A1Y2ESJ7
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 
 0.639
A0A1Y2EGT8
RNA helicase.
   
   0.635
A0A1Y2FY44
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 
 0.621
A0A1Y2G4Q3
CBF/Mak21 family-domain-containing protein.
   
 
 0.602
A0A1Y2FFE1
RRM domain-containing protein.
   
 
 0.595
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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