STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FZJ0Pyridoxal phosphate-dependent transferase. (553 aa)    
Predicted Functional Partners:
A0A1Y2FTZ9
Phosphatidic acid phosphatase type 2/haloperoxidase.
    
 0.923
A0A1Y2FYY5
ATP-NAD kinase-like domain-containing protein.
    
 0.849
A0A1Y2G643
ATP-NAD kinase-like domain-containing protein.
 
  
 0.849
A0A1Y2ECY1
Tryptophan synthase.
    
 0.830
A0A1Y2ESL6
Histidine biosynthesis trifunctional-protein.
    
 0.809
A0A1Y2G1Q3
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
 0.809
A0A1Y2FGZ8
Putative 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.754
A0A1Y2FJL2
Nitrate reductase.
   
  0.747
A0A1Y2FY04
Putative cytochrome b5; Belongs to the cytochrome b5 family.
   
  0.747
A0A1Y2F3G0
Cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family.
   
  0.744
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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