STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2G0S7E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1908 aa)    
Predicted Functional Partners:
A0A1Y2ED15
HECT domain-containing protein.
   
 0.998
A0A1Y2FCT4
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.955
A0A1Y2E7V7
Ubiquitin-related domain-containing protein.
   
 0.791
A0A1Y2ETT5
Ubiquitin family-domain-containing protein.
   
 0.791
A0A1Y2F8X7
RING-type domain-containing protein.
   
 0.698
A0A1Y2CXL4
Ubiquitin-related domain-containing protein.
    
  0.695
A0A1Y2F0H9
Uncharacterized protein.
    
  0.695
A0A1Y2CW56
RING-CH-type domain-containing protein.
   
 
 0.677
A0A1Y2F4T4
Homeobox_KN domain-containing protein.
    
 
 0.661
A0A1Y2ESJ4
E1-like protein-activating.
    
 0.660
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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