STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2G1Z2XAP5, circadian clock regulator-domain-containing protein. (331 aa)    
Predicted Functional Partners:
A0A1Y2G1Z5
Pre-mRNA splicing Prp18-interacting factor-domain-containing protein.
   
 
  0.841
A0A1Y2EGA8
WD40-repeat-containing domain protein.
   
 
  0.820
A0A1Y2DJQ9
Smg-4/UPF3 family-domain-containing protein.
   
  0.783
A0A1Y2G1L1
Hepatocellular carcinoma-associated antigen 59-domain-containing protein.
    
  0.765
A0A1Y2E8V5
Ras-induced vulval development antagonist-domain-containing protein.
   
 
  0.735
A0A1Y2EM05
MI domain-containing protein.
    
  0.724
A0A1Y2G1E7
Uncharacterized protein.
   
 
  0.705
A0A1Y2D8G8
RRM domain-containing protein.
   
  0.685
A0A1Y2FG51
RRM domain-containing protein.
   
  0.678
A0A1Y2G3N0
Uncharacterized protein.
    
  0.668
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.