STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2G2R8zf-GRF domain-containing protein. (256 aa)    
Predicted Functional Partners:
A0A1Y2FZ48
3'-5' exonuclease domain-containing protein.
  
 0.998
A0A1Y2G399
3'-5' exonuclease domain-containing protein.
  
 0.998
A0A1Y2F265
RMI1_N domain-containing protein.
    
 0.970
A0A1Y2CRS1
ERCC4 domain-containing protein.
    
 0.962
A0A1Y2FVL2
ERCC4 domain-containing protein.
    
 0.904
A0A1Y2D4Q8
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.902
A0A1Y2C5X8
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.869
A0A1Y2EXC2
AAA_23 domain-containing protein.
  
 0.848
A0A1Y2DXF9
ATP-dependent DNA helicase.
  
 0.847
A0A1Y2EMI0
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.847
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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