STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2G4B1Snf7 family. (215 aa)    
Predicted Functional Partners:
A0A1Y2DXJ4
Snf7-domain-containing protein.
   
 0.998
A0A1Y2G1K0
Snf7-domain-containing protein.
   
 0.997
A0A1Y2F9Z0
Snf7 family.
 
 
 0.990
A0A1Y2F549
Snf7-domain-containing protein.
    
 0.989
A0A1Y2D7U1
Uncharacterized protein.
   
 0.980
A0A1Y2G4A2
Snf7 family.
   
 0.963
A0A1Y2G1P5
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
   
 0.952
A0A1Y2F5V6
Regulator of Vps4 activity in the MVB pathway-domain-containing protein.
    
 0.934
A0A1Y2FHU5
Vacuolar-sorting protein SNF8.
    
 0.884
A0A1Y2G6K5
Vta1 like-domain-containing protein.
    
 0.864
Your Current Organism:
Leucosporidium creatinivorum
NCBI taxonomy Id: 106004
Other names: CBS 8620, L. creatinivorum, Leucosporidiella creatinivora, Leucosporidiella creatinivora (Golubev) J.P. Samp., 2003, Leucosporidium creatinivorum (Golubev) V. de Garcia, M. A. Coelho, T. Maia, L. H. Rosa, A. M. Vaz, C. A. Rosa, J. P. Sampaio, P. Goncalves, M. R. van Broock andD. Libkind, 2015, Rhodotorula creatinivora, Rhodotorula creatinovora, VKM Y-2838
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