STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD09588.1Protein of unknown function DUF214. (411 aa)    
Predicted Functional Partners:
ABD09589.1
ABC transporter related.
 
 0.998
ABD09590.1
Secretion protein HlyD.
 
 
 0.986
ABD09586.1
Secretion protein HlyD.
 
 
 0.981
ABD11814.1
ABC transporter related.
 
 0.979
ABD10196.1
ABC transporter related.
 
 0.970
ABD11997.1
ABC transporter related.
 
 0.949
ABD09587.1
Hypothetical protein.
 
     0.936
ABD12872.1
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
      0.892
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
    
 0.879
phnC
Phosphonate ABC transporter PhnC, ATP-binding; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
      0.837
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.