Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD09636.1 | ABD09638.1 | Francci3_0248 | Francci3_0250 | Transposase. | Binding-protein-dependent transport systems inner membrane component. | 0.401 |
ABD09636.1 | ssuB | Francci3_0248 | Francci3_0249 | Transposase. | ABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.416 |
ABD09638.1 | ABD09636.1 | Francci3_0250 | Francci3_0248 | Binding-protein-dependent transport systems inner membrane component. | Transposase. | 0.401 |
ABD09638.1 | ABD09639.1 | Francci3_0250 | Francci3_0251 | Binding-protein-dependent transport systems inner membrane component. | Putative sulfonate binding protein precursor. | 0.999 |
ABD09638.1 | ABD09640.1 | Francci3_0250 | Francci3_0252 | Binding-protein-dependent transport systems inner membrane component. | Taurine dioxygenase. | 0.722 |
ABD09638.1 | ABD12808.1 | Francci3_0250 | Francci3_3454 | Binding-protein-dependent transport systems inner membrane component. | NADPH-dependent FMN reductase. | 0.911 |
ABD09638.1 | ABD12923.1 | Francci3_0250 | Francci3_3571 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter, substrate-binding protein, aliphatic sulphonates. | 0.732 |
ABD09638.1 | ssuB | Francci3_0250 | Francci3_0249 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.999 |
ABD09639.1 | ABD09638.1 | Francci3_0251 | Francci3_0250 | Putative sulfonate binding protein precursor. | Binding-protein-dependent transport systems inner membrane component. | 0.999 |
ABD09639.1 | ABD09640.1 | Francci3_0251 | Francci3_0252 | Putative sulfonate binding protein precursor. | Taurine dioxygenase. | 0.814 |
ABD09639.1 | ABD10698.1 | Francci3_0251 | Francci3_1321 | Putative sulfonate binding protein precursor. | Conserved hypothetical protein. | 0.566 |
ABD09639.1 | ABD10716.1 | Francci3_0251 | Francci3_1339 | Putative sulfonate binding protein precursor. | Adenylylsulfate kinase. | 0.467 |
ABD09639.1 | ABD12808.1 | Francci3_0251 | Francci3_3454 | Putative sulfonate binding protein precursor. | NADPH-dependent FMN reductase. | 0.928 |
ABD09639.1 | ABD12921.1 | Francci3_0251 | Francci3_3569 | Putative sulfonate binding protein precursor. | Binding-protein-dependent transport systems inner membrane component. | 0.826 |
ABD09639.1 | ssuB | Francci3_0251 | Francci3_0249 | Putative sulfonate binding protein precursor. | ABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.998 |
ABD09640.1 | ABD09638.1 | Francci3_0252 | Francci3_0250 | Taurine dioxygenase. | Binding-protein-dependent transport systems inner membrane component. | 0.722 |
ABD09640.1 | ABD09639.1 | Francci3_0252 | Francci3_0251 | Taurine dioxygenase. | Putative sulfonate binding protein precursor. | 0.814 |
ABD09640.1 | ABD12921.1 | Francci3_0252 | Francci3_3569 | Taurine dioxygenase. | Binding-protein-dependent transport systems inner membrane component. | 0.420 |
ABD09640.1 | ABD12923.1 | Francci3_0252 | Francci3_3571 | Taurine dioxygenase. | ABC transporter, substrate-binding protein, aliphatic sulphonates. | 0.414 |
ABD09640.1 | ssuB | Francci3_0252 | Francci3_0249 | Taurine dioxygenase. | ABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.625 |
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