Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD10138.1 | ABD10331.1 | Francci3_0754 | Francci3_0947 | Twin-arginine translocation pathway signal. | FHA domain containing protein. | 0.664 |
ABD10138.1 | ABD10562.1 | Francci3_0754 | Francci3_1183 | Twin-arginine translocation pathway signal. | FHA domain containing protein. | 0.664 |
ABD10138.1 | ABD10593.1 | Francci3_0754 | Francci3_1215 | Twin-arginine translocation pathway signal. | Cell cycle protein; Belongs to the SEDS family. | 0.815 |
ABD10138.1 | ABD10791.1 | Francci3_0754 | Francci3_1414 | Twin-arginine translocation pathway signal. | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family. | 0.736 |
ABD10138.1 | ABD10800.1 | Francci3_0754 | Francci3_1423 | Twin-arginine translocation pathway signal. | DivIVA. | 0.831 |
ABD10138.1 | ABD13188.1 | Francci3_0754 | Francci3_3838 | Twin-arginine translocation pathway signal. | Hypothetical protein. | 0.808 |
ABD10138.1 | ftsZ | Francci3_0754 | Francci3_1418 | Twin-arginine translocation pathway signal. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.676 |
ABD10138.1 | mltG | Francci3_0754 | Francci3_3212 | Twin-arginine translocation pathway signal. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.756 |
ABD10138.1 | murC | Francci3_0754 | Francci3_1417 | Twin-arginine translocation pathway signal. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.814 |
ABD10138.1 | murD | Francci3_0754 | Francci3_1413 | Twin-arginine translocation pathway signal. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.672 |
ABD10331.1 | ABD10138.1 | Francci3_0947 | Francci3_0754 | FHA domain containing protein. | Twin-arginine translocation pathway signal. | 0.664 |
ABD10331.1 | ABD10562.1 | Francci3_0947 | Francci3_1183 | FHA domain containing protein. | FHA domain containing protein. | 0.750 |
ABD10562.1 | ABD10138.1 | Francci3_1183 | Francci3_0754 | FHA domain containing protein. | Twin-arginine translocation pathway signal. | 0.664 |
ABD10562.1 | ABD10331.1 | Francci3_1183 | Francci3_0947 | FHA domain containing protein. | FHA domain containing protein. | 0.750 |
ABD10593.1 | ABD10138.1 | Francci3_1215 | Francci3_0754 | Cell cycle protein; Belongs to the SEDS family. | Twin-arginine translocation pathway signal. | 0.815 |
ABD10593.1 | ABD10791.1 | Francci3_1215 | Francci3_1414 | Cell cycle protein; Belongs to the SEDS family. | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family. | 0.659 |
ABD10593.1 | ftsZ | Francci3_1215 | Francci3_1418 | Cell cycle protein; Belongs to the SEDS family. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.489 |
ABD10593.1 | mltG | Francci3_1215 | Francci3_3212 | Cell cycle protein; Belongs to the SEDS family. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.430 |
ABD10593.1 | murC | Francci3_1215 | Francci3_1417 | Cell cycle protein; Belongs to the SEDS family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.857 |
ABD10593.1 | murD | Francci3_1215 | Francci3_1413 | Cell cycle protein; Belongs to the SEDS family. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.840 |
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