STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD10160.1Conserved hypothetical protein. (169 aa)    
Predicted Functional Partners:
ABD10772.1
GCN5-related N-acetyltransferase.
  
     0.762
ABD10158.1
Transcriptional regulator, XRE family.
 
     0.756
ABD10159.1
Patatin.
       0.705
ABD12455.1
Glycosyl transferase, group 1.
  
     0.682
ABD12443.1
Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.679
ABD10019.1
Hypothetical protein.
  
     0.657
ABD13750.1
Conserved hypothetical protein.
  
     0.656
ABD09563.1
Glycosyl transferase, group 1.
  
     0.653
ABD12561.1
Transcriptional regulator, XRE family.
  
     0.647
ABD11280.1
Conserved hypothetical protein.
  
     0.625
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.