STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD10225.1Conserved hypothetical protein. (101 aa)    
Predicted Functional Partners:
ABD11982.1
ATPase.
  
     0.685
ABD12240.1
Transcriptional regulator, XRE family.
  
     0.678
ABD09777.1
Transcriptional regulator, XRE family.
  
     0.622
ABD11681.1
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
     0.586
ABD10226.1
Transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
       0.568
ABD11922.1
Conserved hypothetical protein.
  
     0.531
ABD09582.1
Putative IS630 family transposase.
  
     0.518
ABD09513.1
Putative signal transduction protein with Nacht domain.
  
     0.517
ABD12239.1
Conserved hypothetical protein.
  
     0.512
ABD11449.1
Luciferase-like.
  
     0.490
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.