Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD10310.1 | ABD10328.1 | Francci3_0926 | Francci3_0944 | Beta-ketoacyl synthase. | Short-chain dehydrogenase/reductase SDR. | 0.472 |
ABD10310.1 | ABD10374.1 | Francci3_0926 | Francci3_0991 | Beta-ketoacyl synthase. | Acyl transferase region. | 0.997 |
ABD10310.1 | ABD10494.1 | Francci3_0926 | Francci3_1114 | Beta-ketoacyl synthase. | Polyketide synthase-like. | 0.994 |
ABD10310.1 | ABD10495.1 | Francci3_0926 | Francci3_1115 | Beta-ketoacyl synthase. | Acyl transferase region. | 0.998 |
ABD10310.1 | ABD12338.1 | Francci3_0926 | Francci3_2981 | Beta-ketoacyl synthase. | Beta-ketoacyl synthase. | 0.995 |
ABD10327.1 | ABD10328.1 | Francci3_0943 | Francci3_0944 | FAD linked oxidase-like. | Short-chain dehydrogenase/reductase SDR. | 0.422 |
ABD10328.1 | ABD10310.1 | Francci3_0944 | Francci3_0926 | Short-chain dehydrogenase/reductase SDR. | Beta-ketoacyl synthase. | 0.472 |
ABD10328.1 | ABD10327.1 | Francci3_0944 | Francci3_0943 | Short-chain dehydrogenase/reductase SDR. | FAD linked oxidase-like. | 0.422 |
ABD10328.1 | ABD10329.1 | Francci3_0944 | Francci3_0945 | Short-chain dehydrogenase/reductase SDR. | Hypothetical protein. | 0.416 |
ABD10328.1 | ABD10374.1 | Francci3_0944 | Francci3_0991 | Short-chain dehydrogenase/reductase SDR. | Acyl transferase region. | 0.400 |
ABD10328.1 | ABD10494.1 | Francci3_0944 | Francci3_1114 | Short-chain dehydrogenase/reductase SDR. | Polyketide synthase-like. | 0.403 |
ABD10328.1 | ABD10495.1 | Francci3_0944 | Francci3_1115 | Short-chain dehydrogenase/reductase SDR. | Acyl transferase region. | 0.400 |
ABD10328.1 | ABD12338.1 | Francci3_0944 | Francci3_2981 | Short-chain dehydrogenase/reductase SDR. | Beta-ketoacyl synthase. | 0.428 |
ABD10329.1 | ABD10328.1 | Francci3_0945 | Francci3_0944 | Hypothetical protein. | Short-chain dehydrogenase/reductase SDR. | 0.416 |
ABD10374.1 | ABD10310.1 | Francci3_0991 | Francci3_0926 | Acyl transferase region. | Beta-ketoacyl synthase. | 0.997 |
ABD10374.1 | ABD10328.1 | Francci3_0991 | Francci3_0944 | Acyl transferase region. | Short-chain dehydrogenase/reductase SDR. | 0.400 |
ABD10374.1 | ABD10494.1 | Francci3_0991 | Francci3_1114 | Acyl transferase region. | Polyketide synthase-like. | 0.986 |
ABD10374.1 | ABD10495.1 | Francci3_0991 | Francci3_1115 | Acyl transferase region. | Acyl transferase region. | 0.996 |
ABD10374.1 | ABD12338.1 | Francci3_0991 | Francci3_2981 | Acyl transferase region. | Beta-ketoacyl synthase. | 0.994 |
ABD10494.1 | ABD10310.1 | Francci3_1114 | Francci3_0926 | Polyketide synthase-like. | Beta-ketoacyl synthase. | 0.994 |
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