Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABD10615.1Putative transposase. (172 aa)    
Predicted Functional Partners:
ABD11500.1
Protein of unknown function DUF820.
  
     0.681
ABD11495.1
Putative IS493-like transposase.
  
     0.619
ABD09537.1
Response regulator receiver protein.
  
     0.614
ABD11159.1
Response regulator receiver protein.
  
     0.614
ABD11435.1
Response regulator receiver protein.
  
     0.614
ABD11896.1
Response regulator receiver protein.
  
     0.614
ABD10345.1
Transposase, IS4 family.
  
     0.605
ABD09514.1
Response regulator receiver protein.
  
     0.594
ABD13550.1
ABC-2.
  
     0.530
ABD11251.1
Transposase and inactivated derivatives-like.
  
    0.512
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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