STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD10824.1Putative transglycosylase associated protein. (99 aa)    
Predicted Functional Partners:
ABD11155.1
Putative signal transduction histidine kinase.
  
    0.640
ABD13138.1
UBA/THIF-type NAD/FAD binding fold.
  
     0.583
ABD09607.1
Putative serine/threonine kinase anti-sigma factor.
  
    0.536
ABD11432.1
Conserved hypothetical protein.
  
     0.491
ABD11510.1
Putative serine/threonine kinase anti-sigma factor.
  
    0.489
ABD13774.1
Haloacid dehalogenase-like hydrolase.
  
     0.487
ABD10823.1
Serine/threonine protein kinase.
       0.470
ABD10405.1
Transcriptional regulator, XRE family.
  
     0.459
egtD
Conserved hypothetical protein; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
   
    0.459
ssgB
Sporulation and cell division protein SsgA; Involved in sporulation-specific cell division. Required for early stages of sporulation. Important in the process of growth cessation prior to sporulation-specific cell division. Recruits cell division protein FtsZ to the future septum sites and tethers the contractile ring structure (Z ring) to the cytoplasmic membrane during sporulation. Stimulates polymerization and filament length of FtsZ in vitro (By similarity).
  
     0.454
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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