Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD10137.1 | ABD10656.1 | Francci3_0753 | Francci3_1278 | Conserved hypothetical protein. | Transketolase-like. | 0.963 |
ABD10137.1 | ABD11013.1 | Francci3_0753 | Francci3_1637 | Conserved hypothetical protein. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.915 |
ABD10137.1 | ABD13372.1 | Francci3_0753 | Francci3_4022 | Conserved hypothetical protein. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.915 |
ABD10137.1 | ABD13710.1 | Francci3_0753 | Francci3_4364 | Conserved hypothetical protein. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.938 |
ABD10137.1 | eno | Francci3_0753 | Francci3_3923 | Conserved hypothetical protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.946 |
ABD10137.1 | pgi | Francci3_0753 | Francci3_0045 | Conserved hypothetical protein. | Glucose-6-phosphate isomerase. | 0.900 |
ABD10137.1 | pgk | Francci3_0753 | Francci3_1638 | Conserved hypothetical protein. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.763 |
ABD10137.1 | tal | Francci3_0753 | Francci3_1648 | Conserved hypothetical protein. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.957 |
ABD10137.1 | tpiA | Francci3_0753 | Francci3_1639 | Conserved hypothetical protein. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.954 |
ABD10137.1 | zwf | Francci3_0753 | Francci3_1647 | Conserved hypothetical protein. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.957 |
ABD10656.1 | ABD10137.1 | Francci3_1278 | Francci3_0753 | Transketolase-like. | Conserved hypothetical protein. | 0.963 |
ABD10656.1 | ABD11013.1 | Francci3_1278 | Francci3_1637 | Transketolase-like. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.896 |
ABD10656.1 | ABD13372.1 | Francci3_1278 | Francci3_4022 | Transketolase-like. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.896 |
ABD10656.1 | ABD13710.1 | Francci3_1278 | Francci3_4364 | Transketolase-like. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.964 |
ABD10656.1 | eno | Francci3_1278 | Francci3_3923 | Transketolase-like. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.938 |
ABD10656.1 | pgi | Francci3_1278 | Francci3_0045 | Transketolase-like. | Glucose-6-phosphate isomerase. | 0.977 |
ABD10656.1 | pgk | Francci3_1278 | Francci3_1638 | Transketolase-like. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.753 |
ABD10656.1 | tal | Francci3_1278 | Francci3_1648 | Transketolase-like. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.998 |
ABD10656.1 | tpiA | Francci3_1278 | Francci3_1639 | Transketolase-like. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.942 |
ABD10656.1 | zwf | Francci3_1278 | Francci3_1647 | Transketolase-like. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.782 |
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