Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD11187.1 | ABD11188.1 | Francci3_1811 | Francci3_1812 | NUDIX hydrolase. | Thymidylate kinase-like. | 0.670 |
ABD11187.1 | ABD11189.1 | Francci3_1811 | Francci3_1813 | NUDIX hydrolase. | Hypothetical protein. | 0.662 |
ABD11187.1 | ABD11190.1 | Francci3_1811 | Francci3_1814 | NUDIX hydrolase. | Radical SAM. | 0.668 |
ABD11188.1 | ABD11187.1 | Francci3_1812 | Francci3_1811 | Thymidylate kinase-like. | NUDIX hydrolase. | 0.670 |
ABD11188.1 | ABD11189.1 | Francci3_1812 | Francci3_1813 | Thymidylate kinase-like. | Hypothetical protein. | 0.780 |
ABD11188.1 | ABD11190.1 | Francci3_1812 | Francci3_1814 | Thymidylate kinase-like. | Radical SAM. | 0.778 |
ABD11188.1 | ABD11191.1 | Francci3_1812 | Francci3_1815 | Thymidylate kinase-like. | Pterin-4-alpha-carbinolamine dehydratase. | 0.402 |
ABD11188.1 | ABD11192.1 | Francci3_1812 | Francci3_1816 | Thymidylate kinase-like. | Flavoprotein. | 0.465 |
ABD11188.1 | ABD11193.1 | Francci3_1812 | Francci3_1817 | Thymidylate kinase-like. | Hypothetical protein. | 0.404 |
ABD11189.1 | ABD11187.1 | Francci3_1813 | Francci3_1811 | Hypothetical protein. | NUDIX hydrolase. | 0.662 |
ABD11189.1 | ABD11188.1 | Francci3_1813 | Francci3_1812 | Hypothetical protein. | Thymidylate kinase-like. | 0.780 |
ABD11189.1 | ABD11190.1 | Francci3_1813 | Francci3_1814 | Hypothetical protein. | Radical SAM. | 0.792 |
ABD11189.1 | ABD11191.1 | Francci3_1813 | Francci3_1815 | Hypothetical protein. | Pterin-4-alpha-carbinolamine dehydratase. | 0.402 |
ABD11189.1 | ABD11192.1 | Francci3_1813 | Francci3_1816 | Hypothetical protein. | Flavoprotein. | 0.402 |
ABD11189.1 | ABD11193.1 | Francci3_1813 | Francci3_1817 | Hypothetical protein. | Hypothetical protein. | 0.402 |
ABD11190.1 | ABD11187.1 | Francci3_1814 | Francci3_1811 | Radical SAM. | NUDIX hydrolase. | 0.668 |
ABD11190.1 | ABD11188.1 | Francci3_1814 | Francci3_1812 | Radical SAM. | Thymidylate kinase-like. | 0.778 |
ABD11190.1 | ABD11189.1 | Francci3_1814 | Francci3_1813 | Radical SAM. | Hypothetical protein. | 0.792 |
ABD11190.1 | ABD11191.1 | Francci3_1814 | Francci3_1815 | Radical SAM. | Pterin-4-alpha-carbinolamine dehydratase. | 0.402 |
ABD11190.1 | ABD11192.1 | Francci3_1814 | Francci3_1816 | Radical SAM. | Flavoprotein. | 0.408 |
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